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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101266183 protein (Solanum lycopersicum) - STRING interaction network
"101266183" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101266183annotation not available (854 aa)    
Predicted Functional Partners:
101243998
annotation not available (255 aa)
           
  0.682
Solyc05g007500.2.1
CAAX amino terminal protease family protein (335 aa)
         
  0.582
Solyc05g014190.2.1
CAAX amino terminal protease family protein (209 aa)
         
  0.579
101258948
Uncharacterized protein; No pollen germination related 1 (706 aa)
           
  0.513
101244021
CAAX amino terminal protease family protein (369 aa)
         
  0.457
101246880
Uncharacterized protein; Embryo sac development arrest 7 (701 aa)
           
  0.456
Solyc05g010480.2.1
Transducin family protein / WD-40 repeat family protein (396 aa)
           
  0.456
Solyc01g098150.2.1
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (812 aa)
           
  0.455
BL3
Hop-interacting protein THI035 (644 aa)
           
  0.454
Solyc10g085520.1.1
annotation not available (140 aa)
   
          0.434
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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