STRINGSTRING
Solyc02g069820.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g069820.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g069820.2.1Uncharacterized protein (123 aa)    
Predicted Functional Partners:
UBI3
Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin tha [...] (156 aa)
       
 
  0.933
Solyc04g056290.2.1
Uncharacterized protein (369 aa)
       
      0.717
Solyc01g105240.2.1
Uncharacterized protein (366 aa)
       
      0.717
Solyc11g005670.1.1
Ubiquitin (534 aa)
       
 
  0.622
Solyc10g006480.1.1
Ubiquitin (457 aa)
       
 
  0.622
Solyc12g096420.1.1
Uncharacterized protein (551 aa)
       
      0.615
Solyc12g094690.1.1
Uncharacterized protein (186 aa)
       
      0.615
Solyc12g088740.1.1
Uncharacterized protein (693 aa)
       
      0.615
Solyc12g087860.1.1
Uncharacterized protein (373 aa)
       
      0.615
Solyc12g087840.1.1
Uncharacterized protein (315 aa)
       
      0.615
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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