STRINGSTRING
Solyc02g070520.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g070520.2.1" - alpha-1,2-Mannosidase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g070520.2.1alpha-1,2-Mannosidase (629 aa)    
Predicted Functional Partners:
Solyc01g112240.2.1
Uncharacterized protein (446 aa)
     
  0.945
gluII
Alpha glucosidase II (921 aa)
         
  0.929
Solyc06g063260.2.1
alpha-1,2-Mannosidase (565 aa)
     
 
0.814
Solyc03g123900.2.1
alpha-1,2-Mannosidase (579 aa)
     
 
0.814
Solyc07g056010.2.1
Uncharacterized protein (736 aa)
     
    0.666
Solyc02g087290.2.1
Alpha-mannosidase (1151 aa)
     
 
  0.523
Solyc11g069340.1.1
Uncharacterized protein (921 aa)
       
      0.513
Solyc03g121260.2.1
Uncharacterized protein (569 aa)
       
      0.513
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
           
  0.493
Solyc05g006950.2.1
Embryo yellow protein (835 aa)
     
 
  0.424
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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