STRINGSTRING
SD1 protein (Solanum lycopersicum) - STRING interaction network
"SD1" - Sterol 22-desaturase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SD1Sterol 22-desaturase ; Required to form the C-22 double bond in the sterol side chain. Possesses in vitro C-22 desaturase activity toward beta- sitosterol to produce stigmasterol. No activity with 24-epi- campesterol (501 aa)    
Predicted Functional Partners:
Solyc02g069490.2.1
Delta(24)-sterol reductase-like (579 aa)
         
  0.913
DWF1
DWARF1/DIMINUTO (568 aa)
         
  0.913
Mi-1.1
NBS-LRR resistance protein-like protein (1251 aa)
       
 
  0.707
LARS
leucine--tRNA ligase, cytoplasmic (1079 aa)
           
  0.700
Solyc05g005140.2.1
Uncharacterized protein (603 aa)
           
  0.691
Solyc04g077970.2.1
Uncharacterized protein (266 aa)
           
  0.691
Solyc02g072310.2.1
Uncharacterized protein (471 aa)
           
  0.691
Solyc04g077440.2.1
Uncharacterized protein (525 aa)
     
 
  0.596
bc2.1
Squalene epoxidase 3-like (EC-1.14.13.132) (463 aa)
     
 
  0.596
Solyc09g059240.2.1
Uncharacterized protein (518 aa)
   
     
  0.582
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]