STRINGSTRING
Solyc02g071260.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g071260.2.1" - Phytochrome in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Solyc02g071260.2.1Phytochrome ; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1137 aa)    
Predicted Functional Partners:
Solyc01g102300.2.1
Uncharacterized protein (715 aa)
       
 
  0.760
Solyc09g063010.2.1
Uncharacterized protein (557 aa)
       
 
  0.706
COP1
COP1 homolog (677 aa)
     
 
  0.613
HY5
Transcription factor HY5 ; Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light- induced genes (158 aa)
       
 
  0.565
Solyc07g043270.2.1
Uncharacterized protein (849 aa)
       
 
  0.519
IAA3
IAA3 ; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (185 aa)
       
 
  0.515
Solyc06g071960.2.1
Nucleoside diphosphate kinase (224 aa)
     
 
  0.514
Solyc03g110960.2.1
Nucleoside diphosphate kinase (233 aa)
     
 
  0.514
LOC543596
Cryptochrome 2 (635 aa)
       
 
  0.511
LOC544219
Cryptochrome 1 (679 aa)
       
 
  0.511
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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