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STRINGSTRING
Solyc02g071800.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g071800.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g071800.2.1annotation not available (908 aa)    
Predicted Functional Partners:
Solyc12g013860.1.1
annotation not available (332 aa)
           
  0.585
101250630
Rubber elongation factor protein (REF) (287 aa)
           
  0.585
101256399
annotation not available (628 aa)
           
  0.585
101253428
Rubber elongation factor protein (REF) (227 aa)
           
  0.585
101268063
Glutaredoxin family protein (143 aa)
     
   
  0.551
101260939
3’-5’-exoribonuclease family protein (255 aa)
       
 
  0.487
101248635
annotation not available (687 aa)
           
  0.442
Solyc03g078120.2.1
annotation not available (150 aa)
           
  0.442
101252775
annotation not available (316 aa)
           
  0.439
101260714
annotation not available (316 aa)
           
  0.439
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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