STRINGSTRING
Solyc02g071980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g071980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g071980.2.1Uncharacterized protein (690 aa)    
Predicted Functional Partners:
Solyc01g098840.2.1
Uncharacterized protein (392 aa)
       
      0.786
Solyc03g005590.1.1
Uncharacterized protein (1071 aa)
     
   
  0.521
Solyc02g079400.2.1
Nitric oxide synthase-interacting protein homolog (304 aa)
           
  0.516
Solyc11g039830.1.1
Uncharacterized protein (738 aa)
       
 
  0.498
Solyc03g118170.2.1
Uncharacterized protein (621 aa)
       
 
  0.498
Solyc04g080570.2.1
Uncharacterized protein (273 aa)
       
      0.470
Solyc02g085040.2.1
Uncharacterized protein (270 aa)
       
      0.470
Solyc02g062600.2.1
Uncharacterized protein (268 aa)
       
      0.470
Solyc11g065120.1.1
Uncharacterized protein (1129 aa)
     
   
  0.461
Solyc04g071040.2.1
Uncharacterized protein (1126 aa)
     
   
  0.461
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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