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STRINGSTRING
101246786 protein (Solanum lycopersicum) - STRING interaction network
"101246786" - RING/FYVE/PHD-type zinc finger family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101246786RING/FYVE/PHD-type zinc finger family protein (690 aa)    
Predicted Functional Partners:
Solyc02g036390.1.1
Uncharacterized protein; Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain (785 aa)
     
   
  0.885
Solyc05g007290.1.1
annotation not available (1009 aa)
     
   
  0.851
101260719
annotation not available (1126 aa)
     
   
  0.851
Solyc03g005590.1.1
annotation not available (1071 aa)
     
   
  0.765
Solyc12g099750.1.1
annotation not available (82 aa)
     
   
  0.740
Solyc12g099740.1.1
annotation not available (1025 aa)
     
   
  0.740
Solyc11g065120.1.1
annotation not available (1129 aa)
     
   
  0.740
101261961
Mevalonate kinase (392 aa)
       
      0.699
101255688
Tic22-like family protein (293 aa)
       
      0.635
101251334
Uncharacterized protein; Nucleotide-diphospho-sugar transferases superfamily protein (307 aa)
           
  0.619
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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