STRINGSTRING
Solyc02g072030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g072030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g072030.1.1Uncharacterized protein (377 aa)    
Predicted Functional Partners:
Solyc11g006670.1.1
Uncharacterized protein (244 aa)
           
  0.489
Solyc03g120190.2.1
Uncharacterized protein (275 aa)
           
  0.489
Solyc06g082450.1.1
Uncharacterized protein (188 aa)
           
  0.457
Solyc01g090870.1.1
Uncharacterized protein (174 aa)
           
  0.457
Solyc09g082080.1.1
Uncharacterized protein (211 aa)
           
  0.447
Solyc08g041820.2.1
Uncharacterized protein (349 aa)
       
 
  0.410
T12
Homeobox protein knotted-1-like LET12 ; May have a role to play in formative events in ovule and embryo morphogenesis (431 aa)
       
 
  0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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