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Solyc02g072120.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g072120.2.1" - ER lumen protein-retaining receptor in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g072120.2.1ER lumen protein-retaining receptor (215 aa)    
Predicted Functional Partners:
Solyc12g049420.1.1
Uncharacterized protein (218 aa)
     
 
  0.741
Solyc06g063030.2.1
Uncharacterized protein (218 aa)
     
 
  0.741
Solyc03g122090.2.1
Uncharacterized protein (218 aa)
     
 
  0.741
Solyc03g025860.2.1
Uncharacterized protein (219 aa)
     
 
  0.736
Solyc11g013000.1.1
Uncharacterized protein (210 aa)
     
  0.732
Solyc10g045640.1.1
Uncharacterized protein (214 aa)
     
  0.732
Solyc06g060450.2.1
Uncharacterized protein (215 aa)
     
  0.732
Solyc06g060440.1.1
Uncharacterized protein (213 aa)
     
  0.732
Solyc06g060430.1.1
Uncharacterized protein (92 aa)
     
  0.732
Solyc05g013130.2.1
Uncharacterized protein (213 aa)
     
  0.732
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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