STRINGSTRING
Solyc02g072130.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g072130.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g072130.2.1Uncharacterized protein (475 aa)    
Predicted Functional Partners:
Solyc06g010060.1.1
Uncharacterized protein (112 aa)
     
  0.998
Solyc03g116990.1.1
Uncharacterized protein (109 aa)
     
  0.998
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.996
Solyc09g009180.2.1
Uncharacterized protein (686 aa)
     
  0.986
Solyc03g007610.2.1
Uncharacterized protein (715 aa)
     
  0.986
Solyc03g044000.1.1
Uncharacterized protein (146 aa)
   
  0.984
Solyc02g092430.1.1
Uncharacterized protein (146 aa)
   
  0.984
Solyc02g064670.1.1
Uncharacterized protein (146 aa)
   
  0.984
Solyc08g075850.2.1
Uncharacterized protein (159 aa)
   
  0.984
Solyc07g063960.2.1
Uncharacterized protein (189 aa)
   
  0.984
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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