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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101245021 protein (Solanum lycopersicum) - STRING interaction network
"101245021" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245021annotation not available (475 aa)    
Predicted Functional Partners:
101245464
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (112 aa)
     
  0.998
101245632
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (109 aa)
     
  0.998
101268712
annotation not available (686 aa)
     
 
  0.994
Solyc03g007610.2.1
annotation not available (715 aa)
     
 
  0.994
101245405
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit; Essential subunit of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains (434 aa)
     
 
  0.992
Solyc11g021130.1.1
annotation not available (285 aa)
   
 
  0.990
Solyc04g049260.1.1
annotation not available (166 aa)
   
 
  0.990
101256652
Uncharacterized protein; Staurosporin and temperature sensitive 3-like A (772 aa)
     
 
  0.986
101259924
Uncharacterized protein; Staurosporin and temperature sensitive 3-like b (725 aa)
     
 
  0.986
101261758
annotation not available (334 aa)
     
 
  0.983
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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