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STRINGSTRING
Solyc02g074590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g074590.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g074590.2.1annotation not available (70 aa)    
Predicted Functional Partners:
Solyc12g005230.1.1
annotation not available (987 aa)
     
      0.646
Solyc07g064060.2.1
annotation not available (908 aa)
     
      0.646
101254240
Uncharacterized protein; Homolog of yeast autophagy 18 (ATG18) H (982 aa)
     
      0.646
101258023
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast thylakoid membrane, chloroplast; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 14 growth stages; Has 34 Blast hits to /.../teins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (161 aa)
           
  0.522
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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