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STRINGSTRING
101258429 protein (Solanum lycopersicum) - STRING interaction network
"101258429" - Auxin repressed/dormancy associated protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258429Auxin repressed/dormancy associated protein (123 aa)    
Predicted Functional Partners:
Solyc09g018750.2.1
Uncharacterized protein; Cystathionine beta-synthase (CBS) family protein (197 aa)
     
        0.691
GRX1
SlGRX1 protein (292 aa)
           
  0.684
101246719
annotation not available (182 aa)
           
  0.684
101246306
annotation not available (253 aa)
     
   
  0.655
Solyc11g020860.1.1
BEST Arabidopsis thaliana protein match is- Galactosyltransferase family protein (TAIR-AT4G21060.1); Has 30 Blast hits to 30 proteins in 8 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (sou /.../CBI BLink) (81 aa)
           
  0.627
Solyc01g091270.2.1
annotation not available (302 aa)
           
  0.627
101259198
Dormancy/auxin associated family protein (128 aa)
     
     
0.568
Solyc05g053270.1.1
annotation not available (71 aa)
           
  0.567
Solyc05g053260.2.1
Uncharacterized protein; S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (561 aa)
           
  0.567
101247888
annotation not available (300 aa)
           
  0.518
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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