STRINGSTRING
Solyc02g078200.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g078200.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g078200.2.1Uncharacterized protein (264 aa)    
Predicted Functional Partners:
Solyc00g026870.1.1
Annotation not available (465 aa)
     
  0.988
Solyc08g067950.2.1
Uncharacterized protein (160 aa)
     
    0.985
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
     
    0.985
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
     
    0.985
Solyc11g071320.1.1
Uncharacterized protein (146 aa)
     
  0.977
Solyc11g068820.1.1
Uncharacterized protein (206 aa)
     
  0.977
Solyc08g068220.2.1
Uncharacterized protein (146 aa)
     
  0.977
Solyc03g114050.2.1
Uncharacterized protein (182 aa)
     
    0.973
Solyc08g075850.2.1
Uncharacterized protein (159 aa)
     
  0.967
Solyc07g063960.2.1
Uncharacterized protein (189 aa)
     
  0.967
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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