STRINGSTRING
Solyc02g078230.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g078230.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g078230.1.1Uncharacterized protein (1785 aa)    
Predicted Functional Partners:
Solyc10g079030.1.1
Uncharacterized protein (226 aa)
       
 
  0.598
Solyc03g064020.2.1
Uncharacterized protein (224 aa)
       
 
  0.598
Solyc01g086850.2.1
Uncharacterized protein (225 aa)
       
 
  0.598
Solyc12g005500.1.1
Uncharacterized protein (283 aa)
       
      0.493
Solyc10g008140.2.1
Uncharacterized protein (289 aa)
       
      0.493
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
       
 
  0.487
wee1
Protein kinase WEE1 (510 aa)
       
      0.474
Solyc01g066940.2.1
Uncharacterized protein (221 aa)
           
  0.426
Solyc12g007210.1.1
Uncharacterized protein (211 aa)
       
 
  0.424
Solyc10g055520.1.1
Uncharacterized protein (159 aa)
       
 
  0.424
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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