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rpb2 protein (Solanum lycopersicum) - STRING interaction network
"rpb2" - DNA-directed RNA polymerase II subunit RPB2 in Solanum lycopersicum
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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rpb2DNA-directed RNA polymerase II subunit RPB2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is [...] (1191 aa)    
Predicted Functional Partners:
RPE1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1678 aa)
   
 
  0.974
101244156
Uncharacterized protein; DNA-directed RNA polymerase, RBP11-like (116 aa)
     
 
  0.970
Solyc11g021130.1.1
annotation not available (285 aa)
   
 
  0.966
Solyc04g049260.1.1
annotation not available (166 aa)
   
 
  0.966
RPB1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1846 aa)
   
 
  0.963
101260591
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1677 aa)
 
 
  0.963
101248675
annotation not available (319 aa)
   
 
  0.931
101259753
Uncharacterized protein; DNA-directed RNA polymerase II (177 aa)
     
 
  0.920
101265201
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1390 aa)
 
 
  0.914
101251196
annotation not available (71 aa)
   
 
  0.905
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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