STRINGSTRING
Solyc02g078390.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g078390.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g078390.2.1Uncharacterized protein (907 aa)    
Predicted Functional Partners:
Solyc00g017880.1.1
Annotation not available (1083 aa)
 
   
  0.610
Solyc02g077280.2.1
Uncharacterized protein (438 aa)
 
   
  0.592
Solyc09g008040.2.1
Uncharacterized protein (563 aa)
   
      0.590
Solyc08g065970.2.1
Uncharacterized protein (551 aa)
   
      0.576
Solyc06g072710.2.1
Uncharacterized protein (505 aa)
   
      0.576
Solyc03g097320.2.1
Uncharacterized protein (509 aa)
   
      0.576
Solyc03g007370.2.1
Uncharacterized protein (515 aa)
   
      0.576
Solyc01g087690.1.1
Uncharacterized protein (421 aa)
   
      0.576
Solyc01g081490.2.1
Uncharacterized protein (613 aa)
   
      0.576
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
        0.549
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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