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STRINGSTRING
Solyc02g078810.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g078810.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g078810.2.1annotation not available (484 aa)    
Predicted Functional Partners:
Solyc09g090370.2.1
annotation not available (346 aa)
           
  0.597
Solyc09g015660.2.1
annotation not available (361 aa)
           
  0.597
Solyc10g008070.2.1
Uncharacterized protein; Global transcription factor group E4 (362 aa)
           
  0.583
101264194
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Non-SMC condensin II complex, subunit H2-like (InterPro-IPR009378); Has 249 Blast hits to 211 proteins in 82 species- Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 8; Plants - 30; Viruses - 0; Other Eukaryotes - 66 (so /.../NCBI BLink) (678 aa)
           
  0.560
AGO7
AGO7; Argonaute family protein; Belongs to the argonaute family (1000 aa)
           
  0.521
101251280
Cell division cycle protein 48-related / CDC48-related (1194 aa)
           
  0.451
101055603
Hop-interacting protein THI109 (708 aa)
           
  0.424
101258231
annotation not available (701 aa)
           
  0.400
Solyc07g062660.2.1
annotation not available (752 aa)
           
  0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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