STRINGSTRING
Solyc02g078980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g078980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g078980.2.1Uncharacterized protein (308 aa)    
Predicted Functional Partners:
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
   
   
  0.701
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
   
   
  0.620
Solyc11g040030.1.1
Uncharacterized protein (176 aa)
       
 
  0.602
Solyc04g009350.2.1
Uncharacterized protein (414 aa)
       
 
  0.602
Solyc10g083110.1.1
4-hydroxy-tetrahydrodipicolinate synthase (317 aa)
       
      0.600
Solyc03g044660.2.1
Uncharacterized protein (357 aa)
       
      0.600
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
     
 
  0.574
Solyc00g030210.1.1
Annotation not available (1147 aa)
   
   
  0.506
Solyc10g085590.1.1
Uncharacterized protein (403 aa)
       
      0.483
Solyc09g065770.1.1
Uncharacterized protein (350 aa)
       
      0.483
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]