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Solyc02g079260.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g079260.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
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Databases
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[Homology]
Score
Solyc02g079260.1.1Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (1056 aa)    
Predicted Functional Partners:
Solyc04g051610.2.1
Uncharacterized protein; Violaxanthin de-epoxidase-related (339 aa)
           
  0.950
Solyc11g030570.1.1
Uncharacterized protein; NADH dehydrogenase subunit 4 (63 aa)
           
  0.764
Solyc07g053980.2.1
Uncharacterized protein; Glucan synthase-like 5 (1745 aa)
           
  0.671
Solyc02g078230.1.1
Uncharacterized protein; Glucan synthase-like 1 (1785 aa)
           
  0.671
Solyc03g043720.2.1
Uncharacterized protein; BRICK1, putative (95 aa)
           
  0.593
CRY3
Cryptochrome DASH, chloroplastic/mitochondrial; May have a photoreceptor function and might bind ss- and ds-DNA in a sequence non-specific manner. Lacks photolyase activity. Has a potential role in detecting the dawn and dusk transitions and, consequently, in circadian input pathways (577 aa)
     
   
  0.552
101251530
annotation not available (339 aa)
           
  0.550
101244800
annotation not available (340 aa)
           
  0.550
GLK2
annotation not available (192 aa)
           
  0.442
GLK1
annotation not available (543 aa)
           
  0.442
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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