STRINGSTRING
Solyc02g079330.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g079330.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g079330.2.1Uncharacterized protein (421 aa)    
Predicted Functional Partners:
Solyc10g083270.1.1
Uncharacterized protein (331 aa)
       
      0.435
Solyc06g064640.2.1
Uncharacterized protein (378 aa)
       
      0.435
Solyc04g005190.2.1
Uncharacterized protein (1055 aa)
       
      0.435
Solyc12g040510.1.1
Uncharacterized protein (329 aa)
     
        0.412
ArcA1
LeArcA1 protein (326 aa)
     
        0.412
ArcA2
LeArcA2 protein (326 aa)
     
        0.412
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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