STRINGSTRING
Solyc02g079440.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g079440.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g079440.1.1Uncharacterized protein (538 aa)    
Predicted Functional Partners:
Solyc12g099260.1.1
Uncharacterized protein (608 aa)
     
 
  0.563
Solyc01g059880.2.1
Uncharacterized protein (608 aa)
     
 
  0.563
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
   
  0.507
Solyc09g014760.2.1
Uncharacterized protein (408 aa)
       
  0.504
Solyc08g041850.2.1
Uncharacterized protein (305 aa)
       
  0.504
Solyc07g017770.2.1
Uncharacterized protein (402 aa)
       
  0.504
Solyc03g114300.2.1
Uncharacterized protein (401 aa)
       
  0.504
Solyc03g051810.2.1
Uncharacterized protein (333 aa)
       
  0.504
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
         
  0.492
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
   
  0.488
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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