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STRINGSTRING
Solyc02g080910.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g080910.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g080910.2.1annotation not available (759 aa)    
Predicted Functional Partners:
TPG6
Polygalacturonase (395 aa)
       
  0.929
PS-2
Dehiscence polygalacturonase (392 aa)
       
  0.929
PMEU1
Pectinesterase/pectinesterase inhibitor U1; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family (583 aa)
       
  0.927
101248642
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (570 aa)
   
 
  0.850
101260091
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin (580 aa)
   
 
  0.850
PGcat
Uncharacterized protein; Polygalacturonase (397 aa)
         
  0.807
XOPG1
Polygalacturonase (452 aa)
         
  0.807
LOC544004
Polygalacturonase 1 (392 aa)
       
  0.765
PME3
Pectinesterase 3; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family (543 aa)
       
  0.763
101259963
Uncharacterized protein; Duplicated homeodomain-like superfamily protein (319 aa)
           
  0.749
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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