STRINGSTRING
Solyc02g080960.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g080960.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g080960.1.1Uncharacterized protein (75 aa)    
Predicted Functional Partners:
Solyc03g051900.2.1
Uncharacterized protein (1979 aa)
     
  0.994
Solyc02g085230.2.1
Uncharacterized protein (1051 aa)
     
  0.993
Solyc03g093480.2.1
Uncharacterized protein (2149 aa)
     
  0.993
Solyc03g120080.2.1
Uncharacterized protein (666 aa)
     
  0.993
Solyc03g097160.2.1
Uncharacterized protein (871 aa)
     
  0.988
BMS1
Ribosome biogenesis protein BMS1 homolog (1231 aa)
     
  0.987
Solyc04g051670.2.1
Uncharacterized protein (1030 aa)
     
 
  0.984
Solyc05g011990.2.1
Uncharacterized protein (940 aa)
     
  0.981
Solyc01g087670.2.1
Uncharacterized protein (907 aa)
     
  0.977
Solyc07g066410.2.1
Uncharacterized protein (810 aa)
     
  0.973
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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