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Solyc02g080980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g080980.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g080980.2.1annotation not available (425 aa)    
Predicted Functional Partners:
101249760
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1110 aa)
   
 
  0.973
101253854
Uncharacterized protein; tRNA synthetase class I (I, L, M and V) family protein; Belongs to the class-I aminoacyl-tRNA synthetase family (1182 aa)
   
 
  0.956
Solyc02g080990.1.1
annotation not available (540 aa)
 
          0.940
101263723
Uncharacterized protein; methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; Belongs to the class-I aminoacyl-tRNA synthetase family (812 aa)
   
 
  0.928
101261392
annotation not available (649 aa)
     
 
  0.912
101255211
Tyrosine--tRNA ligase; Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial (521 aa)
   
   
  0.872
101251377
annotation not available (564 aa)
   
 
  0.870
101256769
Uncharacterized protein; Cysteinyl-tRNA synthetase, class Ia family protein (569 aa)
   
 
  0.870
Solyc12g019110.1.1
annotation not available (700 aa)
     
 
  0.863
Solyc12g019100.1.1
annotation not available (331 aa)
     
 
  0.863
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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