STRINGSTRING
Solyc02g080980.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g080980.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g080980.2.1Uncharacterized protein (425 aa)    
Predicted Functional Partners:
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
   
  0.976
Solyc06g068320.2.1
Uncharacterized protein (515 aa)
   
  0.951
Solyc03g117330.2.1
Uncharacterized protein (504 aa)
   
  0.951
Solyc01g096870.2.1
Uncharacterized protein (547 aa)
   
  0.951
Solyc02g080990.1.1
Uncharacterized protein (540 aa)
 
          0.949
Solyc01g080810.2.1
Uncharacterized protein (1110 aa)
   
  0.901
Solyc11g012140.1.1
Uncharacterized protein (1182 aa)
   
  0.900
Solyc12g019110.1.1
Uncharacterized protein (700 aa)
   
 
  0.880
Solyc03g097290.2.1
Uncharacterized protein (1010 aa)
   
 
  0.864
Solyc01g111990.2.1
Alanyl-tRNA synthetase ; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain (987 aa)
   
 
  0.864
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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