STRINGSTRING
Solyc02g081420.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g081420.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g081420.2.1Uncharacterized protein (1090 aa)    
Predicted Functional Partners:
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
     
  0.824
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
     
  0.824
Solyc04g049770.2.1
Uncharacterized protein (423 aa)
     
  0.775
UPF2
Regulator of nonsense transcripts UPF2 (769 aa)
     
  0.775
Solyc10g049480.1.1
Uncharacterized protein (461 aa)
     
  0.757
Solyc07g005880.2.1
Uncharacterized protein (1012 aa)
     
  0.731
Solyc02g062620.2.1
Uncharacterized protein (257 aa)
       
  0.716
Solyc12g019960.1.1
Uncharacterized protein (597 aa)
       
  0.715
Solyc10g080740.1.1
Uncharacterized protein (967 aa)
       
  0.715
Solyc03g114690.2.1
Uncharacterized protein (989 aa)
     
 
  0.655
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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