STRINGSTRING
Solyc02g081660.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g081660.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g081660.2.1Uncharacterized protein (440 aa)    
Predicted Functional Partners:
Solyc09g090300.2.1
Uncharacterized protein (123 aa)
     
 
  0.935
Solyc02g084730.2.1
rRNA adenine N(6)-methyltransferase (386 aa)
     
 
  0.700
Solyc01g100430.2.1
rRNA adenine N(6)-methyltransferase (354 aa)
     
 
  0.700
Solyc01g091800.2.1
rRNA adenine N(6)-methyltransferase (365 aa)
     
 
  0.700
Solyc01g006980.2.1
Uncharacterized protein (359 aa)
   
      0.667
Solyc10g005910.2.1
Uncharacterized protein (710 aa)
 
   
  0.639
Solyc01g090200.2.1
Uncharacterized protein (1061 aa)
   
        0.582
Solyc00g026870.1.1
Annotation not available (465 aa)
   
   
  0.576
Solyc02g081910.1.1
DNA topoisomerase ; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand (1175 aa)
 
   
  0.575
Solyc09g009940.2.1
Uncharacterized protein (567 aa)
 
   
  0.535
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]