• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc02g081900.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g081900.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g081900.2.1annotation not available (836 aa)    
Predicted Functional Partners:
101250201
Zinc finger (Ran-binding) family protein (407 aa)
     
 
  0.576
104644501
Zinc finger (Ran-binding) family protein (783 aa)
       
 
  0.575
101264457
Zinc finger (Ran-binding) family protein (874 aa)
       
 
  0.563
101256901
Uncharacterized protein; Ran BP2/NZF zinc finger-like superfamily protein (480 aa)
       
 
  0.558
ndhD
annotation not available (120 aa)
           
  0.407
Solyc01g065620.1.1
annotation not available (121 aa)
           
  0.407
Solyc01g065610.1.1
annotation not available (108 aa)
           
  0.407
Solyc01g065600.1.1
annotation not available (217 aa)
           
  0.407
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (8%) [HD]