STRINGSTRING
Solyc02g082110.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g082110.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g082110.2.1Uncharacterized protein (181 aa)    
Predicted Functional Partners:
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
       
 
  0.982
cdc5
CDC5-like protein (987 aa)
     
 
  0.981
Solyc11g067010.1.1
Uncharacterized protein (117 aa)
       
      0.931
Solyc09g009300.2.1
Uncharacterized protein (197 aa)
       
      0.931
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
       
      0.922
DHX16
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 (886 aa)
       
 
  0.873
Solyc09g011060.2.1
Clade IV lectin receptor kinase (832 aa)
       
 
  0.873
Solyc03g115400.1.1
Uncharacterized protein (137 aa)
       
 
  0.873
Solyc03g115390.2.1
Uncharacterized protein (909 aa)
       
 
  0.873
Solyc11g071700.1.1
Uncharacterized protein (1111 aa)
     
      0.620
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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