STRINGSTRING
Solyc02g082250.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g082250.2.1" - Thioredoxin reductase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g082250.2.1Thioredoxin reductase (367 aa)    
Predicted Functional Partners:
Solyc10g082030.1.1
Uncharacterized protein (267 aa)
   
 
  0.974
Solyc01g007740.2.1
Uncharacterized protein (267 aa)
   
 
  0.974
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
 
0.955
Solyc03g096040.2.1
Uncharacterized protein (219 aa)
   
 
  0.929
Solyc08g083110.2.1
Uncharacterized protein (444 aa)
     
 
  0.904
Solyc08g008580.2.1
Uncharacterized protein (447 aa)
     
 
  0.904
Solyc05g055000.2.1
Uncharacterized protein (477 aa)
         
  0.904
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
   
 
  0.899
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
   
 
  0.899
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
   
 
  0.899
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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