STRINGSTRING
Solyc02g082660.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g082660.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g082660.2.1Uncharacterized protein (1211 aa)    
Predicted Functional Partners:
Solyc08g007330.2.1
Uncharacterized protein (792 aa)
   
  0.955
Solyc10g018530.1.1
Uncharacterized protein (511 aa)
   
  0.952
Solyc10g018540.1.1
Uncharacterized protein (343 aa)
   
  0.949
MSH2
Mismatch repair protein ; Component of the post-replicative DNA mismatch repair system (MMR) (943 aa)
   
  0.948
Solyc09g090890.1.1
Uncharacterized protein (144 aa)
   
  0.946
MSH1
DNA mismatch repair protein (1137 aa)
   
  0.946
MSH7
Mismatch repair protein (811 aa)
   
  0.946
Solyc07g018340.2.1
Uncharacterized protein (320 aa)
   
  0.946
Solyc01g079520.2.1
Uncharacterized protein ; Component of the post-replicative DNA mismatch repair system (MMR) (1312 aa)
   
  0.946
Solyc00g017880.1.1
Annotation not available (1083 aa)
   
  0.946
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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