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STRINGSTRING
101253341 protein (Solanum lycopersicum) - STRING interaction network
"101253341" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101253341annotation not available (371 aa)    
Predicted Functional Partners:
100136876
Ribonuclease E (935 aa)
   
 
  0.763
101244745
Protein of unknown function (DUF1218) (161 aa)
           
  0.638
101244202
annotation not available (160 aa)
           
  0.638
101243788
annotation not available (159 aa)
           
  0.638
101268280
Inorganic carbon transport protein-related (196 aa)
     
   
  0.579
101247253
annotation not available (194 aa)
           
  0.556
Solyc03g096090.2.1
BEST Arabidopsis thaliana protein match is- proline-rich family protein (TAIR-AT3G09000.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryot /.../610 (source- NCBI BLink) (486 aa)
           
  0.501
101252666
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- chloroplast; EXPRESSED IN- 20 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- 3-dehydroquinate synthase, prokaryotic-typ /.../erPro-IPR002812); Has 390 Blast hits to 390 proteins in 131 species- Archae - 144; Bacteria - 105; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 87 (source- NCBI BLink) (394 aa)
           
  0.450
Solyc11g021130.1.1
annotation not available (285 aa)
   
   
  0.417
Solyc04g049260.1.1
annotation not available (166 aa)
   
   
  0.417
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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