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Solyc02g083380.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g083380.2.1" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g083380.2.1Unknown protein; Has 39 Blast hits to 39 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (72 aa)    
Predicted Functional Partners:
101264013
Unknown protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- endomembrane system; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G10660.1); Has 35333 Blast hits to 34131 protei /.../2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (302 aa)
           
  0.885
101248806
Uncharacterized protein; Glucose-methanol-choline (GMC) oxidoreductase family protein (575 aa)
           
  0.765
101261618
annotation not available (270 aa)
           
  0.581
101258013
Protein of unknown function (DUF833) (272 aa)
           
  0.581
101245129
annotation not available (366 aa)
           
  0.571
101260894
annotation not available (365 aa)
           
  0.571
101257528
annotation not available (367 aa)
           
  0.571
dxs
1-D-deoxyxylulose 5-phosphate synthase (719 aa)
           
  0.558
101263739
Uncharacterized protein; Tetraspanin10; Belongs to the tetraspanin (TM4SF) family (264 aa)
           
  0.556
Solyc06g035720.2.1
annotation not available (330 aa)
           
  0.504
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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