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STRINGSTRING
Solyc02g083670.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g083670.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g083670.2.1annotation not available (75 aa)    
Predicted Functional Partners:
101245570
Uncharacterized protein; Histidine kinase 5 (1018 aa)
   
     
  0.832
Solyc12g099670.1.1
annotation not available (304 aa)
           
  0.738
Solyc03g116720.1.1
Histidine phosphotransfer protein 6 (115 aa)
       
 
  0.726
Solyc11g071630.1.1
Uncharacterized protein; Response regulator 24 (141 aa)
   
     
  0.580
101244285
annotation not available (251 aa)
   
   
  0.572
Solyc10g019260.1.1
annotation not available (304 aa)
     
   
  0.550
101251043
annotation not available (319 aa)
     
   
  0.550
101258827
Uncharacterized protein; Isopentenyltransferase 9; Belongs to the IPP transferase family (449 aa)
           
  0.550
Never-ripe
Ethylene receptor; Ethylene receptor neverripe (635 aa)
   
     
  0.536
ETR1
Ethylene receptor 1; May act early in the ethylene signal transduction pathway, possibly as an ethylene receptor, or as a regulator of the pathway (754 aa)
   
     
  0.526
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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