STRINGSTRING
Solyc02g084000.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g084000.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g084000.2.1Uncharacterized protein (268 aa)    
Predicted Functional Partners:
Solyc01g079210.2.1
Uncharacterized protein (451 aa)
     
  0.978
Solyc06g065700.2.1
Uncharacterized protein (685 aa)
     
 
  0.969
Solyc02g078300.2.1
Uncharacterized protein (128 aa)
     
 
  0.968
Solyc07g006820.2.1
Uncharacterized protein (1823 aa)
     
 
  0.968
Solyc11g012150.1.1
Uncharacterized protein (500 aa)
       
 
  0.965
Solyc04g009830.2.1
Uncharacterized protein (360 aa)
       
  0.944
Solyc12g037980.1.1
Uncharacterized protein (435 aa)
     
  0.944
Solyc11g013520.1.1
Uncharacterized protein (447 aa)
     
  0.939
Solyc07g053190.2.1
Enhancer of polycomb-like protein (790 aa)
     
  0.938
Solyc02g081650.2.1
Enhancer of polycomb-like protein (447 aa)
     
  0.938
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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