STRINGSTRING
TBG6 protein (Solanum lycopersicum) - STRING interaction network
"TBG6" - Beta-galactosidase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBG6Beta-galactosidase (845 aa)    
Predicted Functional Partners:
Solyc05g054600.2.1
Uncharacterized protein (619 aa)
       
      0.898
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
       
      0.601
Solyc08g014480.2.1
Uncharacterized protein (1110 aa)
         
  0.443
Solyc11g069010.1.1
Uncharacterized protein (518 aa)
 
     
  0.404
Solyc03g006980.2.1
Uncharacterized protein (486 aa)
 
     
  0.401
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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