• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
101245311 protein (Solanum lycopersicum) - STRING interaction network
"101245311" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245311Uncharacterized protein; Methylthiotransferase (623 aa)    
Predicted Functional Partners:
101257700
Uncharacterized protein; Ribosome recycling factor, chloroplast precursor (267 aa)
   
   
  0.928
Solyc06g071460.2.1
annotation not available (238 aa)
     
 
  0.924
101259142
annotation not available (312 aa)
     
        0.857
101252524
Uncharacterized protein; Tetratricopeptide repeat (TPR)-like superfamily protein (545 aa)
     
        0.852
101247618
Uncharacterized protein; phenylalanyl-tRNA synthetase class IIc family protein (342 aa)
   
        0.851
101248868
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX; Belongs to the Mg-chelatase subunits D/I family (766 aa)
     
        0.851
101254024
Antitermination NusB domain-containing protein (291 aa)
     
        0.842
101258949
Flavodoxin family protein / radical SAM domain-containing protein (663 aa)
     
 
  0.828
101267058
Uncharacterized protein; Ribosomal RNA processing 4 (325 aa)
     
 
  0.820
101245909
Uncharacterized protein; RNA binding;GTP binding; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (438 aa)
   
        0.816
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (11%) [HD]