STRINGSTRING
Solyc02g084970.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g084970.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g084970.2.1Uncharacterized protein (275 aa)    
Predicted Functional Partners:
Solyc01g103950.2.1
Uncharacterized protein (553 aa)
       
    0.585
Solyc10g005290.2.1
Uncharacterized protein (357 aa)
       
  0.527
Solyc08g005990.2.1
Uncharacterized protein (223 aa)
       
  0.527
Solyc04g049550.2.1
Uncharacterized protein (307 aa)
       
  0.527
Solyc04g009580.2.1
Uncharacterized protein (309 aa)
       
  0.527
Solyc04g082390.2.1
Uncharacterized protein (238 aa)
         
  0.492
Solyc05g054460.2.1
Uncharacterized protein (335 aa)
         
  0.477
Solyc06g074960.2.1
Uncharacterized protein (676 aa)
     
 
  0.475
Solyc05g014970.2.1
Urea amidohydrolase (834 aa)
           
  0.475
Solyc08g066180.2.1
Uncharacterized protein (587 aa)
         
  0.454
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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