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STRINGSTRING
LOC543847 protein (Solanum lycopersicum) - STRING interaction network
"LOC543847" - Ovate protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543847Ovate protein (278 aa)    
Predicted Functional Partners:
104646050
Ovate family protein 5 (377 aa)
           
  0.934
101262405
Ovate family protein 14 (275 aa)
           
  0.931
100191118
FAS protein (177 aa)
           
  0.806
ORFX
Fw2.2; ORFX (163 aa)
           
  0.806
543617
Lanceolate (400 aa)
       
 
  0.802
THox2
Homeobox 2 protein (310 aa)
       
 
  0.797
101244699
Uncharacterized protein; BEL1-like homeodomain 1 (700 aa)
       
 
  0.797
101253442
BAC19.5 (373 aa)
           
  0.797
101249302
Ovate family protein 11 (211 aa)
           
  0.760
101247035
annotation not available (351 aa)
           
  0.739
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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