STRINGSTRING
Solyc02g085650.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g085650.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g085650.2.1Uncharacterized protein (646 aa)    
Predicted Functional Partners:
Solyc01g108600.2.1
Uncharacterized protein (1072 aa)
     
      0.633
Solyc08g074440.2.1
Uncharacterized protein (639 aa)
     
      0.606
Solyc11g013370.1.1
Uncharacterized protein (847 aa)
       
      0.602
Solyc01g073690.2.1
Mitochondrial ATP synthesis coupled proton transport protein (246 aa)
       
      0.602
Solyc01g006040.2.1
Uncharacterized protein (555 aa)
       
      0.602
Solyc01g006030.2.1
Uncharacterized protein (339 aa)
       
      0.602
Solyc08g075730.2.1
Fe-S cluster assembly protein DRE2 homolog ; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (267 aa)
     
      0.590
Solyc03g119420.2.1
Fe-S cluster assembly protein DRE2 homolog ; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery. Required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis. Electrons are transferred to the Fe-S cluster from NADPH via a FAD- and FMN-containing diflavin oxidoreductase. Has anti- apoptotic effects in the cell (264 aa)
     
      0.590
Solyc11g005360.1.1
Uncharacterized protein (92 aa)
       
 
  0.534
Solyc08g081250.2.1
Uncharacterized protein (999 aa)
     
   
  0.491
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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