STRINGSTRING
Solyc02g086150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g086150.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g086150.2.1Uncharacterized protein (132 aa)    
Predicted Functional Partners:
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
   
   
  0.629
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
   
   
  0.629
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
   
   
  0.629
Solyc05g056260.2.1
Uncharacterized protein (342 aa)
   
   
  0.613
Solyc11g020590.1.1
Uncharacterized protein (256 aa)
   
   
  0.549
Solyc09g074650.2.1
Uncharacterized protein (420 aa)
   
   
  0.549
Solyc03g078020.2.1
Uncharacterized protein (283 aa)
   
   
  0.549
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
         
  0.534
Solyc10g084700.1.1
Uncharacterized protein (267 aa)
         
  0.527
Solyc01g058530.2.1
Uncharacterized protein (120 aa)
         
  0.527
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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