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STRINGSTRING
101259306 protein (Solanum lycopersicum) - STRING interaction network
"101259306" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101259306Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (514 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1; Component of light signal transduction machinery. Involved in fruit pigmentation and fruit nutritional quality. Acts as a negative regulator of fruit pigmentation. Probably acts by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes. Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis-promoting factors such as HY5 (1095 aa)
     
 
  0.977
101258564
annotation not available (532 aa)
     
   
  0.972
101265931
annotation not available (583 aa)
     
 
  0.961
Solyc03g019960.2.1
annotation not available (471 aa)
     
 
  0.961
Solyc01g006140.2.1
annotation not available (572 aa)
     
 
  0.961
101267455
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
     
   
  0.954
101255149
Uncharacterized protein; Minichromosome maintenance 10 (415 aa)
     
   
  0.937
101248739
annotation not available (802 aa)
     
 
  0.934
cul4
Uncharacterized protein; Cullin 4 ; Belongs to the cullin family (785 aa)
     
 
  0.934
101259026
annotation not available (831 aa)
     
   
  0.929
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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