STRINGSTRING
Solyc02g086560.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g086560.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g086560.2.1Uncharacterized protein (206 aa)    
Predicted Functional Partners:
Solyc01g086650.2.1
Uncharacterized protein (376 aa)
   
 
  0.791
Solyc01g106390.2.1
Glutamyl-tRNA reductase (552 aa)
 
     
  0.506
Solyc04g015490.2.1
Mg-protoporphyrin IX chelatase ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (766 aa)
         
  0.492
Solyc11g069750.1.1
Uncharacterized protein (525 aa)
   
        0.472
NRT2;3
NRT2;3 protein (517 aa)
   
        0.472
Solyc06g074990.1.1
Uncharacterized protein (526 aa)
   
        0.472
Solyc06g010250.2.1
Uncharacterized protein (498 aa)
   
        0.472
Solyc02g067790.2.1
Uncharacterized protein (460 aa)
   
        0.472
Solyc00g090860.1.1
Annotation not available (148 aa)
   
        0.472
Solyc11g042640.1.1
Uncharacterized protein (276 aa)
   
        0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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