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Solyc02g086780.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g086780.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g086780.2.1Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Proteasome assembly chaperone 3 (InterPro-IPR018788); Has 120 Blast hits to 120 proteins in 47 species- Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source- NCBI BLink) (80 aa)    
Predicted Functional Partners:
101258795
Proteasome assembly chaperone 2; Chaperone protein which promotes assembly of the 20S proteasome as part of a heterodimer with PSMG1 (280 aa)
     
 
  0.965
101247104
annotation not available (110 aa)
     
        0.777
101265540
RNI-like superfamily protein (610 aa)
           
  0.763
101256394
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (236 aa)
     
      0.752
Solyc04g080590.2.1
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family (296 aa)
     
      0.749
101258917
annotation not available (141 aa)
     
 
  0.722
101256488
Uncharacterized protein; FAD/NAD(P)-binding oxidoreductase family protein (708 aa)
           
  0.719
101251155
Uncharacterized protein; Embryo defective 2737 (424 aa)
           
  0.662
101268344
Uncharacterized protein; Pentatricopeptide (PPR) repeat-containing protein (753 aa)
           
  0.660
Solyc05g013820.2.1
Proteasome subunit beta type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1B family (249 aa)
     
      0.636
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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