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fdh protein (Solanum lycopersicum) - STRING interaction network
"fdh" - Formate dehydrogenase, mitochondrial in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
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Textmining
[Homology]
Score
fdhFormate dehydrogenase, mitochondrial; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Involved in the cell stress response; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily (381 aa)    
Predicted Functional Partners:
Solyc08g078490.2.1
annotation not available (333 aa)
       
    0.910
101251299
annotation not available (323 aa)
       
    0.910
Solyc02g092530.2.1
annotation not available (420 aa)
         
    0.900
101267103
annotation not available (571 aa)
     
 
  0.856
101263993
annotation not available (550 aa)
     
 
  0.856
101258131
annotation not available (589 aa)
       
  0.848
ME2
Malic enzyme (579 aa)
       
  0.848
101258530
annotation not available (342 aa)
   
  0.845
Solyc09g091070.1.1
annotation not available (298 aa)
   
  0.845
mMDH
Malate dehydrogenase (346 aa)
   
  0.845
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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