STRINGSTRING
Solyc02g086900.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g086900.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g086900.2.1Uncharacterized protein (471 aa)    
Predicted Functional Partners:
Solyc11g020780.1.1
DCK/dGK-like deoxyribonucleoside kinase (364 aa)
     
      0.910
Solyc08g074370.2.1
Uncharacterized protein (1881 aa)
       
 
  0.881
Solyc03g026350.2.1
Uncharacterized protein (431 aa)
       
      0.617
Solyc06g073650.1.1
Uncharacterized protein (540 aa)
       
      0.602
Solyc03g043870.2.1
Uncharacterized protein (286 aa)
       
      0.568
Solyc01g097110.1.1
Uncharacterized protein (1500 aa)
       
      0.454
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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