STRINGSTRING
Solyc02g087150.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g087150.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g087150.2.1Uncharacterized protein (186 aa)    
Predicted Functional Partners:
Solyc06g082760.2.1
Uncharacterized protein (203 aa)
     
        0.604
Solyc06g082750.2.1
Uncharacterized protein (203 aa)
     
        0.604
Solyc08g083350.2.1
Uncharacterized protein (217 aa)
     
        0.593
Solyc09g007560.2.1
Uncharacterized protein (265 aa)
     
        0.576
Solyc07g062870.2.1
Uncharacterized protein (184 aa)
     
        0.573
Solyc06g051200.2.1
Uncharacterized protein (280 aa)
     
        0.571
Solyc01g056780.2.1
Uncharacterized protein (156 aa)
     
        0.570
Solyc06g065390.2.1
Uncharacterized protein (212 aa)
     
        0.563
Solyc04g079790.2.1
Uncharacterized protein (237 aa)
     
        0.527
Solyc12g014390.1.1
Uncharacterized protein (229 aa)
     
        0.505
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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