STRINGSTRING
MDR1 protein (Solanum lycopersicum) - STRING interaction network
"MDR1" - L04 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDR1L04 (1249 aa)    
Predicted Functional Partners:
Solyc03g098140.2.1
Uncharacterized protein (343 aa)
   
 
  0.733
LOC544127
Ethylene-responsive protein kinase Le-CTR1; Ethylene-responsive protein kinase TCTR1 (829 aa)
     
 
  0.717
EO
2-methylene-furan-3-one reductase-like (EC-1.3.1.105); Enone oxidoreductase involved in the biosynthesis of 4- hydroxy-2,5-dimethyl-3(2H)-furanone (HDMF or furaneol). Can use both NADH and NADPH as the electron donor (388 aa)
   
   
  0.704
Solyc12g007100.1.1
Uncharacterized protein (483 aa)
     
  0.658
Solyc01g087470.2.1
Uncharacterized protein (325 aa)
       
 
  0.638
PIN2
Auxin efflux facilitator SlPIN2 ; May act as a component of the auxin efflux carrier (631 aa)
       
 
  0.622
Solyc10g007420.2.1
Uncharacterized protein (425 aa)
     
  0.599
Solyc10g007240.1.1
Uncharacterized protein (594 aa)
     
  0.599
Solyc10g007230.1.1
Uncharacterized protein (596 aa)
     
  0.599
Solyc10g080080.1.1
Thioredoxin reductase (543 aa)
       
  0.580
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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