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Solyc02g087940.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g087940.2.1" - Unknown protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g087940.2.1Unknown protein; Has 59 Blast hits to 59 proteins in 24 species- Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (184 aa)    
Predicted Functional Partners:
101254859
Uncharacterized protein; Histone mono-ubiquitination 1 (847 aa)
       
      0.840
101246944
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- protein transport, Golgi organization; LOCATED IN- vacuole; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- COG complex component, COG2 (InterP /.../009316); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (742 aa)
       
      0.840
101267297
ARM repeat superfamily protein (2149 aa)
       
      0.840
101249511
annotation not available (296 aa)
       
      0.766
101245125
annotation not available (307 aa)
       
      0.766
101247486
Uncharacterized protein; Copper transporter 5 (149 aa)
           
  0.763
st3
Uncharacterized protein; Putative sugar transporter ; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (480 aa)
           
  0.669
101247255
Major facilitator superfamily protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family (468 aa)
           
  0.669
101263315
annotation not available (622 aa)
       
      0.649
101264814
annotation not available (617 aa)
       
      0.649
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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