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STRINGSTRING
101268241 protein (Solanum lycopersicum) - STRING interaction network
"101268241" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101268241annotation not available (451 aa)    
Predicted Functional Partners:
SSADH
Succinic semialdehyde dehydrogenase ; Belongs to the aldehyde dehydrogenase family (522 aa)
     
        0.846
Solyc12g008970.1.1
annotation not available (463 aa)
     
        0.713
101264840
annotation not available (514 aa)
     
        0.713
mdh
Malate dehydrogenase (442 aa)
     
 
  0.697
101253131
annotation not available (332 aa)
     
 
  0.697
chMDH
Uncharacterized protein; Chloroplast malate dehydrogenase (467 aa)
     
 
  0.697
cMDH
Malate dehydrogenase (334 aa)
     
 
  0.697
Solyc01g081050.2.1
Uncharacterized protein; AMP-dependent synthetase and ligase family protein (1206 aa)
           
  0.693
101252556
Uncharacterized protein; CONTAINS InterPro DOMAIN/s- Cytochrome B561-related, N-terminal (InterPro-IPR019176); Has 215 Blast hits to 213 proteins in 79 species- Archae - 0; Bacteria - 6; Metazoa - 131; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 14 (source- NCB /.../k) (685 aa)
           
  0.554
101247213
Uncharacterized protein; Homolog of yeast ergosterol28 (129 aa)
           
  0.551
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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