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STRINGSTRING
Solyc02g088550.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc02g088550.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc02g088550.2.1annotation not available (512 aa)    
Predicted Functional Partners:
101247472
annotation not available (1846 aa)
     
 
  0.981
101257890
Ubiquitin-protein ligase 4 (1553 aa)
     
 
  0.981
Solyc01g111530.2.1
annotation not available (1860 aa)
     
 
  0.981
101264260
Transducin family protein / WD-40 repeat family protein (757 aa)
     
 
  0.949
101248688
annotation not available (411 aa)
     
 
  0.939
Solyc07g064590.2.1
OTU-like cysteine protease family protein (188 aa)
       
 
  0.934
101251966
annotation not available (366 aa)
     
 
  0.927
Solyc10g086770.1.1
Josephin family protein (207 aa)
     
 
  0.926
101249452
annotation not available (409 aa)
     
 
  0.925
rad23
RAD23 protein (389 aa)
     
 
  0.925
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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